Myriads full output


Input file was: aaDHO_neu.dat


NOTATION FOR THE METHODS:

B: Bonferroni method (Dunn 1961).
BH: The Benjamini & Hochberg method (Benjamini & Hochberg 1995).
BKY: The two-stage linear step-up procedure (TST in Benjamini et al 2006).
BonSEV: BonferroniSEV (modified from Li et al. 2017 to incorporate SLIM PI0 estimation).
BY: The Benjamini & Yekutieli method (Benjamini & Yekutieli 2001).
Hommel: Hommel's procedure in linear time (Hommel 1988; Meijer et al 2019).
SB: The sequential Bonferroni method (Holm 1979).
SGoF: The SGoF method (BMC Bioinformatics: Carvajal-Rodriguez et al 2009).
SLIM: Sliding Linear Model (Wang et al 2011).

Total number of tests = 5662.
Number of tests below user defined nominal Type I error rate 0.05 = 156.
Gamma for expectations under SGoF metatest = 0.05.
Values in red mean that the corresponding adjusted p-value (or q-value) is lower than the user-defined error rate.
π0 estimation method was the mode of all methods.

TEST-IDP-valueBBHBKYBonSEVBYHommelSBSGoF(0.05)SLIM q-value (π0 = 1)
66150_280.04761910.7027430.7378811110.14285711
99665_180.04761910.7027430.7378811110.14285711
29306_200.04761910.7027430.7378811110.14285711
32689_70.04761910.7027430.7378811110.14285711
45658_420.04761910.7027430.7378811110.14285711
78468_150.04761910.7027430.7378811110.14285711
51686_140.04761910.7027430.7378811110.14285711
36935_1140.04761910.7027430.7378811110.14285711
57421_360.04761910.7027430.7378811110.14285711
105082_360.04761910.7027430.7378811110.14285711
40594_600.04761910.7027430.7378811110.14285711
55834_90.04761910.7027430.7378811110.14285711
71618_260.04761910.7027430.7378811110.14285711
77824_230.04761910.7027430.7378811110.14285711
53690_380.04761910.7027430.7378811110.14285711
48727_70.04761910.7027430.7378811110.14285711
79532_410.04761910.7027430.7378811110.14285711
29228_140.04761910.7027430.7378811110.14285711
50608_460.04761910.7027430.7378811110.14285711
26485_630.04761910.7027430.7378811110.14285711
33144_570.04761910.7027430.7378811110.14285711
40555_200.04761910.7027430.7378811110.14285711
46501_80.04761910.7027430.7378811110.14285711
26642_130.04761910.7027430.7378811110.14285711
62580_120.04761910.7027430.7378811110.14285711
62651_1190.04761910.7027430.7378811110.14285711
40492_370.04761910.7027430.7378811110.14285711
35761_150.04761910.7027430.7378811110.14285711
5989_170.04761910.7027430.7378811110.14285711
54280_270.04761910.7027430.7378811110.14285711
92777_200.04761910.7027430.7378811110.14285711
45236_210.04761910.7027430.7378811110.14285711
58888_180.04761910.7027430.7378811110.14285711
218737_510.04761910.7027430.7378811110.14285711
62390_80.04761910.7027430.7378811110.14285711
65057_100.04761910.7027430.7378811110.14285711
42076_120.04761910.7027430.7378811110.14285711
84989_430.04761910.7027430.7378811110.14285711
70285_240.04761910.7027430.7378811110.14285711
60406_190.04761910.7027430.7378811110.14285711
58810_390.04761910.7027430.7378811110.14285711
27967_250.04761910.7027430.7378811110.14285711
71603_70.04761910.7027430.7378811110.14285711
29715_510.04761910.7027430.7378811110.14285711
80855_1330.04761910.7027430.7378811110.14285711
43721_130.04761910.7027430.7378811110.14285711
56756_350.04761910.7027430.7378811110.14285711
33235_190.04761910.7027430.7378811110.14285711
32528_190.04761910.7027430.7378811110.14285711
104385_1180.04761910.7027430.7378811110.14285711
30679_510.04761910.7027430.7378811110.14285711
82427_330.04761910.7027430.7378811110.14285711
68087_540.04761910.7027430.7378811110.14285711
43450_390.04761910.7027430.7378811110.14285711
48861_90.04761910.7027430.7378811110.14285711
85016_1040.04761910.7027430.7378811110.14285711
58900_300.04761910.7027430.7378811110.14285711
100651_370.04761910.7027430.7378811110.14285711
40172_70.04761910.7027430.7378811110.14285711
57287_130.04761910.7027430.7378811110.14285711
67512_670.04761910.7027430.7378811110.14285711
57950_200.04761910.7027430.7378811110.14285711
64577_130.04761910.7027430.7378811110.14285711
45597_70.04761910.7027430.7378811110.14285711
65346_500.04761910.7027430.7378811110.14285711
27492_550.04761910.7027430.7378811110.14285711
25735_170.04761910.7027430.7378811110.14285711
57319_90.04761910.7027430.7378811110.14285711
31250_150.04761910.7027430.7378811110.14285711
15409_120.04761910.7027430.7378811110.14285711
27798_90.04761910.7027430.7378811110.14285711
27869_260.04761910.7027430.7378811110.14285711
40802_260.04761910.7027430.7378811110.14285711
64528_770.04761910.7027430.7378811110.14285711
84553_80.04761910.7027430.7378811110.14285711
59799_270.04761910.7027430.7378811110.14285711
68953_880.04761910.7027430.7378811110.14285711
84335_1080.04761910.7027430.7378811110.14285711
63586_150.04761910.7027430.7378811110.14285711
16924_60.04761910.7027430.7378811110.14285711
27034_140.04761910.7027430.7378811110.14285711
42081_280.04761910.7027430.7378811110.14285711
83627_100.04761910.7027430.7378811110.14285711
26146_210.04761910.7027430.7378811110.14285711
32305_210.04761910.7027430.7378811110.14285711
75872_520.04761910.7027430.7378811110.14285711
88031_120.04761910.7027430.7378811110.14285711
57398_190.04761910.7027430.7378811110.14285711
80723_220.04761910.7027430.7378811110.14285711
52502_440.04761910.7027430.7378811110.14285711
102019_720.04761910.7027430.7378811110.14285711
26057_110.04761910.7027430.7378811110.14285711
47259_100.04761910.7027430.7378811110.14285711
54127_110.04761910.7027430.7378811110.14285711
31794_770.04761910.7027430.7378811110.14285711
62421_380.04761910.7027430.7378811110.14285711
51853_270.04761910.7027430.7378811110.14285711
45221_180.04761910.7027430.7378811110.14285711
40703_180.04761910.7027430.7378811110.14285711
79895_960.04761910.7027430.7378811110.14285711
36628_90.04761910.7027430.7378811110.14285711
74786_170.04761910.7027430.7378811110.14285711
77661_430.04761910.7027430.7378811110.14285711
64574_910.04761910.7027430.7378811110.14285711
57296_270.04761910.7027430.7378811110.14285711
39742_270.04761910.7027430.7378811110.14285711
100479_800.04761910.7027430.7378811110.14285711
47500_600.04761910.7027430.7378811110.14285711
55697_170.04761910.7027430.7378811110.14285711
70096_170.04761910.7027430.7378811110.14285711
28509_560.04761910.7027430.7378811110.14285711
62411_240.04761910.7027430.7378811110.14285711
44825_610.04761910.7027430.7378811110.14285711
65076_90.04761910.7027430.7378811110.14285711
78410_90.04761910.7027430.7378811110.14285711
69809_320.04761910.7027430.7378811110.14285711
84967_200.04761910.7027430.7378811110.14285711
70335_110.04761910.7027430.7378811110.14285711
38759_370.04761910.7027430.7378811110.14285711
64384_300.04761910.7027430.7378811110.14285711
52228_310.04761910.7027430.7378811110.14285711
43324_620.04761910.7027430.7378811110.14285711
56850_630.04761910.7027430.7378811110.14285711
39097_450.04761910.7027430.7378811110.14285711
46570_190.04761910.7027430.7378811110.14285711
66729_230.04761910.7027430.7378811110.14285711
66931_1390.04761910.7027430.7378811110.14285711
83666_350.04761910.7027430.7378811110.14285711
66368_460.04761910.7027430.7378811110.14285711
43885_370.04761910.7027430.7378811110.14285711
74321_280.04761910.7027430.7378811110.14285711
51755_630.04761910.7027430.7378811110.14285711
54542_170.04761910.7027430.7378811110.14285711
74876_270.04761910.7027430.7378811110.14285711
32975_210.04761910.7027430.7378811110.14285711
73483_380.04761910.7027430.7378811110.14285711
61969_820.04761910.7027430.7378811110.14285711
71646_760.04761910.7027430.7378811110.14285711
40778_360.04761910.7027430.7378811110.14285711
75690_60.04761910.7027430.7378811110.14285711
6468_160.04761910.7027430.7378811110.14285711
57585_370.04761910.7027430.7378811110.14285711
72313_780.04761910.7027430.7378811110.14285711
34844_140.04761910.7027430.7378811110.14285711
87800_300.04761910.7027430.7378811110.14285711
27962_110.04761910.7027430.7378811110.14285711
51020_130.04761910.7027430.7378811110.14285711
31510_110.04761910.7027430.7378811110.14285711
63360_730.04761910.7027430.7378811110.14285711
33608_150.04761910.7027430.7378811110.14285711
49842_180.04761910.7027430.7378811110.14285711
70452_190.04761910.7027430.7378811110.14285711
75656_190.04761910.7027430.7378811110.14285711
72107_140.04761910.7027430.7378811110.14285711
25826_1410.04761910.7027430.7378811110.14285711
30326_190.04761910.7027430.7378811110.14285711

Adjusted p-values for SGoF were computed following Castro-Conde & de Una-Alvarez 2015. Adjusted Bonferroni, BH, BK, BonSEV, BKY and SB p-values were computed following Yekutieli & Benjamini 1999. Adjusted Hommel p-values were computed following Meijer et al 2019. Adjusted BH p-values coincide with q-values under the complete null hypothesis (π0 = 1) and large number of tests. Values under SLIM correspond to the q-value obtained using the SLIM estimate for the proportion of true nulls.

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(C) 2017-2023 by A. Carvajal-Rodriguez
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