Myriads full output


Input file was: aaLGC_neu.dat


NOTATION FOR THE METHODS:

B: Bonferroni method (Dunn 1961).
BH: The Benjamini & Hochberg method (Benjamini & Hochberg 1995).
BKY: The two-stage linear step-up procedure (TST in Benjamini et al 2006).
BonSEV: BonferroniSEV (modified from Li et al. 2017 to incorporate SLIM PI0 estimation).
BY: The Benjamini & Yekutieli method (Benjamini & Yekutieli 2001).
Hommel: Hommel's procedure in linear time (Hommel 1988; Meijer et al 2019).
SB: The sequential Bonferroni method (Holm 1979).
SGoF: The SGoF method (BMC Bioinformatics: Carvajal-Rodriguez et al 2009).
SLIM: Sliding Linear Model (Wang et al 2011).

Total number of tests = 7100.
Number of tests below user defined nominal Type I error rate 0.05 = 233.
Gamma for expectations under SGoF metatest = 0.05.
Values in red mean that the corresponding adjusted p-value (or q-value) is lower than the user-defined error rate.
π0 estimation method was the mode of all methods.

TEST-IDP-valueBBHBKYBonSEVBYHommelSBSGoF(0.05)SLIM q-value (π0 = 1)
67117_130.0069930110.4795030.50347811110.06666670.709240.756097
44919_250.0069930110.4795030.50347811110.06666670.709240.756097
51805_320.0069930110.4795030.50347811110.06666670.709240.756097
67527_880.0069930110.4795030.50347811110.06666670.709240.756097
79895_960.0069930110.4795030.50347811110.06666670.709240.756097
48709_170.0069930110.4795030.50347811110.06666670.709240.756097
82629_160.0069930110.4795030.50347811110.06666670.709240.756097
68886_440.0069930110.4795030.50347811110.06666670.709240.756097
53524_150.0069930110.4795030.50347811110.06666670.709240.756097
29606_60.0069930110.4795030.50347811110.06666670.709240.756097
57380_460.0069930110.4795030.50347811110.06666670.709240.756097
66204_110.0069930110.4795030.50347811110.06666670.709240.756097
27808_880.0069930110.4795030.50347811110.06666670.709240.756097
65925_140.0069930110.4795030.50347811110.06666670.709240.756097
55868_560.0069930110.4795030.50347811110.06666670.709240.756097
55123_420.0069930110.4795030.50347811110.06666670.709240.756097
78499_1200.0069930110.4795030.50347811110.06666670.709240.756097
52278_620.0069930110.4795030.50347811110.06666670.709240.756097
107461_130.0069930110.4795030.50347811110.06666670.709240.756097
84107_430.0069930110.4795030.50347811110.06666670.709240.756097
59614_460.0069930110.4795030.50347811110.06666670.709240.756097
71160_230.0069930110.4795030.50347811110.06666670.709240.756097
61701_400.0069930110.4795030.50347811110.06666670.709240.756097
44043_220.0069930110.4795030.50347811110.06666670.709240.756097
51547_230.01165510.4795030.50347811110.06666670.709240.756097
44197_500.01165510.4795030.50347811110.06666670.709240.756097
31610_110.01165510.4795030.50347811110.06666670.709240.756097
77663_410.01165510.4795030.50347811110.06666670.709240.756097
44233_100.01165510.4795030.50347811110.06666670.709240.756097
25359_190.01165510.4795030.50347811110.06666670.709240.756097
48177_210.01165510.4795030.50347811110.06666670.709240.756097
29676_240.01165510.4795030.50347811110.06666670.709240.756097
51551_260.01165510.4795030.50347811110.06666670.709240.756097
77097_70.01165510.4795030.50347811110.06666670.709240.756097
62633_840.01165510.4795030.50347811110.06666670.709240.756097
51689_210.01165510.4795030.50347811110.06666670.709240.756097
50997_800.01165510.4795030.50347811110.06666670.709240.756097
28412_130.01165510.4795030.50347811110.06666670.709240.756097
57421_360.01165510.4795030.50347811110.06666670.709240.756097
89229_280.01165510.4795030.50347811110.06666670.709240.756097
76254_270.01165510.4795030.50347811110.06666670.709240.756097
22512_730.01165510.4795030.50347811110.06666670.709240.756097
32906_490.01165510.4795030.50347811110.06666670.709240.756097
42979_400.01165510.4795030.50347811110.06666670.709240.756097
49561_150.01165510.4795030.50347811110.06666670.709240.756097
28878_310.01165510.4795030.50347811110.06666670.709240.756097
71508_240.01165510.4795030.50347811110.06666670.709240.756097
66931_1390.01165510.4795030.50347811110.06666670.709240.756097
60987_540.015384610.4795030.50347811110.06666670.709240.756097
66882_120.015384610.4795030.50347811110.06666670.709240.756097
51608_470.015384610.4795030.50347811110.06666670.709240.756097
41867_270.015384610.4795030.50347811110.06666670.709240.756097
50914_270.015384610.4795030.50347811110.06666670.709240.756097
61363_280.015384610.4795030.50347811110.06666670.709240.756097
65314_410.015384610.4795030.50347811110.06666670.709240.756097
84207_740.015384610.4795030.50347811110.06666670.709240.756097
68141_130.015384610.4795030.50347811110.06666670.709240.756097
71117_370.015384610.4795030.50347811110.06666670.709240.756097
5576_160.015384610.4795030.50347811110.06666670.709240.756097
53709_620.015384610.4795030.50347811110.06666670.709240.756097
106429_130.015384610.4795030.50347811110.06666670.709240.756097
26888_100.015384610.4795030.50347811110.06666670.709240.756097
92201_130.015384610.4795030.50347811110.06666670.709240.756097
62411_240.015384610.4795030.50347811110.06666670.709240.756097
42932_340.015384610.4795030.50347811110.06666670.709240.756097
36436_200.015384610.4795030.50347811110.06666670.709240.756097
72476_520.015384610.4795030.50347811110.06666670.709240.756097
59884_130.015384610.4795030.50347811110.06666670.709240.756097
38243_170.015384610.4795030.50347811110.06666670.709240.756097
55982_560.015384610.4795030.50347811110.06666670.709240.756097
61818_1300.015384610.4795030.50347811110.06666670.709240.756097
74714_230.015384610.4795030.50347811110.06666670.709240.756097
50141_250.015384610.4795030.50347811110.06666670.709240.756097
55869_370.015384610.4795030.50347811110.06666670.709240.756097
33416_110.015384610.4795030.50347811110.06666670.709240.756097
34637_400.015384610.4795030.50347811110.06666670.709240.756097
61459_570.015384610.4795030.50347811110.06666670.709240.756097
33368_710.015384610.4795030.50347811110.06666670.709240.756097
26191_1150.015384610.4795030.50347811110.06666670.709240.756097
74509_280.015384610.4795030.50347811110.06666670.709240.756097
69000_790.015384610.4795030.50347811110.06666670.709240.756097
33610_210.015384610.4795030.50347811110.06666670.709240.756097
59200_570.015384610.4795030.50347811110.06666670.709240.756097
53644_90.015384610.4795030.50347811110.06666670.709240.756097
62407_480.015384610.4795030.50347811110.06666670.709240.756097
37454_240.015384610.4795030.50347811110.06666670.709240.756097
35322_760.015384610.4795030.50347811110.06666670.709240.756097
39938_430.015384610.4795030.50347811110.06666670.709240.756097
25983_160.015384610.4795030.50347811110.06666670.709240.756097
83191_490.015384610.4795030.50347811110.06666670.709240.756097
53469_340.015384610.4795030.50347811110.06666670.709240.756097
33028_210.015384610.4795030.50347811110.06666670.709240.756097
29288_640.015384610.4795030.50347811110.06666670.709240.756097
82844_160.015384610.4795030.50347811110.06666670.709240.756097
46062_620.015384610.4795030.50347811110.06666670.709240.756097
41036_830.015384610.4795030.50347811110.06666670.709240.756097
28233_160.015384610.4795030.50347811110.06666670.709240.756097
33804_660.015384610.4795030.50347811110.06666670.709240.756097
27892_160.015384610.4795030.50347811110.06666670.709240.756097
27545_370.015384610.4795030.50347811110.06666670.709240.756097
62278_140.015384610.4795030.50347811110.06666670.709240.756097
29428_1340.015384610.4795030.50347811110.06666670.709240.756097
71935_600.015384610.4795030.50347811110.06666670.709240.756097
58357_500.015384610.4795030.50347811110.06666670.709240.756097
46513_610.015384610.4795030.50347811110.06666670.709240.756097
69225_100.015384610.4795030.50347811110.06666670.709240.756097
55031_170.015384610.4795030.50347811110.06666670.709240.756097
88002_250.015384610.4795030.50347811110.06666670.709240.756097
57105_300.015384610.4795030.50347811110.06666670.709240.756097
81956_240.015384610.4795030.50347811110.06666670.709240.756097
6414_100.015384610.4795030.50347811110.06666670.709240.756097
75761_390.015384610.4795030.50347811110.06666670.709240.756097
43066_270.015384610.4795030.50347811110.06666670.709240.756097
71730_340.015384610.4795030.50347811110.06666670.709240.756097
71670_1090.015384610.4795030.50347811110.06666670.709240.756097
42340_70.015384610.4795030.50347811110.06666670.709240.756097
93618_100.015384610.4795030.50347811110.06666670.709240.756097
26178_490.015384610.4795030.50347811110.06666670.709240.756097
47289_160.015384610.4795030.50347811110.06666670.709240.756097
73243_60.015384610.4795030.50347811110.06666670.709240.756097
103852_120.015384610.4795030.50347811110.06666670.709240.756097
66519_80.015384610.4795030.50347811110.06666670.709240.756097
47111_680.015384610.4795030.50347811110.06666670.709240.756097
49505_140.015384610.4795030.50347811110.06666670.709240.756097
53205_90.015384610.4795030.50347811110.06666670.709240.756097
28188_850.015384610.4795030.50347811110.06666670.709240.756097
62886_350.015384610.4795030.50347811110.06666670.709240.756097
63295_270.015384610.4795030.50347811110.06666670.709240.756097
38117_70.015384610.4795030.50347811110.06666670.709240.756097
88105_70.015384610.4795030.50347811110.06666670.709240.756097
77352_80.015384610.4795030.50347811110.06666670.709240.756097
12894_80.015384610.4795030.50347811110.06666670.709240.756097
39732_390.015384610.4795030.50347811110.06666670.709240.756097
34379_360.015384610.4795030.50347811110.06666670.709240.756097
24998_250.015384610.4795030.50347811110.06666670.709240.756097
63049_210.015384610.4795030.50347811110.06666670.709240.756097
72303_70.015384610.4795030.50347811110.06666670.709240.756097
26665_730.015384610.4795030.50347811110.06666670.709240.756097
70415_380.02097910.4795030.50347811110.07692310.709240.756097
100990_90.02097910.4795030.50347811110.07692310.709240.756097
83234_140.02097910.4795030.50347811110.07692310.709240.756097
25061_220.02097910.4795030.50347811110.07692310.709240.756097
52606_250.02097910.4795030.50347811110.07692310.709240.756097
29979_220.02097910.4795030.50347811110.07692310.709240.756097
25187_410.02097910.4795030.50347811110.07692310.709240.756097
73920_270.02097910.4795030.50347811110.07692310.709240.756097
94576_160.02097910.4795030.50347811110.07692310.709240.756097
50456_510.02097910.4795030.50347811110.07692310.709240.756097
72949_180.02097910.4795030.50347811110.07692310.709240.756097
75330_80.02097910.4795030.50347811110.07692310.709240.756097
45677_370.02097910.4795030.50347811110.07692310.709240.756097
36702_60.02097910.4795030.50347811110.07692310.709240.756097
33566_760.02097910.4795030.50347811110.07692310.709240.756097
37656_110.02097910.4795030.50347811110.07692310.709240.756097
52257_440.02097910.4795030.50347811110.07692310.709240.756097
59925_750.02097910.4795030.50347811110.07692310.709240.756097
25130_120.02097910.4795030.50347811110.07692310.709240.756097
69530_680.02097910.4795030.50347811110.07692310.709240.756097
41037_270.02097910.4795030.50347811110.07692310.709240.756097
46470_240.02097910.4795030.50347811110.07692310.709240.756097
36940_130.02097910.4795030.50347811110.07692310.709240.756097
39379_110.02097910.4795030.50347811110.07692310.709240.756097
37956_260.02097910.4795030.50347811110.07692310.709240.756097
34464_70.02097910.4795030.50347811110.07692310.709240.756097
30103_320.02097910.4795030.50347811110.07692310.709240.756097
50468_1340.02097910.4795030.50347811110.07692310.709240.756097
87075_100.02097910.4795030.50347811110.07692310.709240.756097
38429_70.02097910.4795030.50347811110.07692310.709240.756097
27191_480.02097910.4795030.50347811110.07692310.709240.756097
26750_1240.02097910.4795030.50347811110.07692310.709240.756097
36821_480.02097910.4795030.50347811110.07692310.709240.756097
51661_610.02097910.4795030.50347811110.07692310.709240.756097
33220_960.02097910.4795030.50347811110.07692310.709240.756097
58412_250.02097910.4795030.50347811110.07692310.709240.756097
32311_100.02097910.4795030.50347811110.07692310.709240.756097
38208_330.02097910.4795030.50347811110.07692310.709240.756097
71646_760.02097910.4795030.50347811110.07692310.709240.756097
69513_500.02097910.4795030.50347811110.07692310.709240.756097
25516_990.02097910.4795030.50347811110.07692310.709240.756097
94264_60.02097910.4795030.50347811110.07692310.709240.756097
43523_70.02097910.4795030.50347811110.07692310.709240.756097
76274_110.02097910.4795030.50347811110.07692310.709240.756097
73621_1200.02097910.4795030.50347811110.07692310.709240.756097
88473_930.02097910.4795030.50347811110.07692310.709240.756097
23472_510.02097910.4795030.50347811110.07692310.709240.756097
66084_630.02097910.4795030.50347811110.07692310.709240.756097
50858_440.02097910.4795030.50347811110.07692310.709240.756097
59994_180.02097910.4795030.50347811110.07692310.709240.756097
39603_70.02097910.4795030.50347811110.07692310.709240.756097
100922_360.02097910.4795030.50347811110.07692310.709240.756097
67799_690.02097910.4795030.50347811110.07692310.709240.756097
33802_100.02097910.4795030.50347811110.07692310.709240.756097
38434_200.02097910.4795030.50347811110.07692310.709240.756097
39765_60.02097910.4795030.50347811110.07692310.709240.756097
31019_180.02097910.4795030.50347811110.07692310.709240.756097
28167_320.02097910.4795030.50347811110.07692310.709240.756097
51846_70.02097910.4795030.50347811110.07692310.709240.756097
51766_430.025330210.4795030.50347811110.07692310.7920150.844341
48560_350.025330210.4795030.50347811110.07692310.7920150.844341
65057_100.025330210.4795030.50347811110.07692310.7920150.844341
86719_420.025330210.4795030.50347811110.07692310.7920150.844341
68991_430.025330210.4795030.50347811110.07692310.7920150.844341
43303_290.025330210.4795030.50347811110.07692310.7920150.844341
28692_100.025330210.4795030.50347811110.07692310.7920150.844341
54018_120.025330210.4795030.50347811110.07692310.7920150.844341
30090_620.025330210.4795030.50347811110.07692310.7920150.844341
69553_520.025330210.4795030.50347811110.07692310.7920150.844341
58046_280.025330210.4795030.50347811110.07692310.7920150.844341
30261_170.025330210.4795030.50347811110.07692310.7920150.844341
29907_90.025330210.4795030.50347811110.07692310.7920150.844341
28442_460.025330210.4795030.50347811110.07692310.7920150.844341
65321_320.025330210.4795030.50347811110.07692310.7920150.844341
49433_150.025330210.4795030.50347811110.07692310.7920150.844341
13955_440.03030310.4795030.50347811110.07692310.877470.935441
79167_370.03030310.4795030.50347811110.07692310.877470.935441
57433_670.03030310.4795030.50347811110.07692310.877470.935441
26702_160.03030310.4795030.50347811110.07692310.877470.935441
36737_260.03030310.4795030.50347811110.07692310.877470.935441
35763_180.03030310.4795030.50347811110.07692310.877470.935441
37677_500.03030310.4795030.50347811110.07692310.877470.935441
48533_770.03030310.4795030.50347811110.07692310.877470.935441
83450_100.03030310.4795030.50347811110.07692310.877470.935441
84141_320.03030310.4795030.50347811110.07692310.877470.935441
26895_80.03030310.4795030.50347811110.07692310.877470.935441
51961_810.03030310.4795030.50347811110.07692310.877470.935441
40732_140.03030310.4795030.50347811110.07692310.877470.935441
58059_450.03030310.4795030.50347811110.07692310.877470.935441
48706_210.03030310.4795030.50347811110.07692310.877470.935441
40146_210.03030310.4795030.50347811110.07692310.877470.935441
58385_200.03030310.4795030.50347811110.07692310.877470.935441
23675_730.03729610.4795030.50347811110.076923111
76155_250.04761910.4795030.50347811110.076923111
70137_340.04761910.4795030.50347811110.076923111

Adjusted p-values for SGoF were computed following Castro-Conde & de Una-Alvarez 2015. Adjusted Bonferroni, BH, BK, BonSEV, BKY and SB p-values were computed following Yekutieli & Benjamini 1999. Adjusted Hommel p-values were computed following Meijer et al 2019. Adjusted BH p-values coincide with q-values under the complete null hypothesis (π0 = 1) and large number of tests. Values under SLIM correspond to the q-value obtained using the SLIM estimate for the proportion of true nulls.

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(C) 2017-2023 by A. Carvajal-Rodriguez
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