IQ-TREE 1.6.11 built Jun 6 2019 Input file name: /tmp/IQTREE/lC4p5CVr88/seqin.fst Type of analysis: ModelFinder + tree reconstruction + ultrafast bootstrap (1000 replicates) Random seed number: 843232 REFERENCES ---------- To cite ModelFinder please use: Subha Kalyaanamoorthy, Bui Quang Minh, Thomas KF Wong, Arndt von Haeseler, and Lars S Jermiin (2017) ModelFinder: Fast model selection for accurate phylogenetic estimates. Nature Methods, 14:587–589. https://doi.org/10.1038/nmeth.4285 To cite IQ-TREE please use: Lam-Tung Nguyen, Heiko A. Schmidt, Arndt von Haeseler, and Bui Quang Minh (2015) IQ-TREE: A fast and effective stochastic algorithm for estimating maximum likelihood phylogenies. Mol Biol Evol, 32:268-274. https://doi.org/10.1093/molbev/msu300 Since you used ultrafast bootstrap (UFBoot) please also cite: Diep Thi Hoang, Olga Chernomor, Arndt von Haeseler, Bui Quang Minh, and Le Sy Vinh (2017) UFBoot2: Improving the ultrafast bootstrap approximation. Mol Biol Evol, in press. https://doi.org/10.1093/molbev/msx281 SEQUENCE ALIGNMENT ------------------ Input data: 263 sequences with 3767 amino-acid sites Number of constant sites: 1185 (= 31.4574% of all sites) Number of invariant (constant or ambiguous constant) sites: 1185 (= 31.4574% of all sites) Number of parsimony informative sites: 1497 Number of distinct site patterns: 2930 ModelFinder ----------- Best-fit model according to BIC: VT+F+R9 List of models sorted by BIC scores: Model LogL AIC w-AIC AICc w-AICc BIC w-BIC VT+F+R9 -333382.3472 667880.6944 - 0.0071 668075.1595 - 0.0149 671359.2855 + 0.7836 VT+F+R10 -333375.3997 667870.7994 + 0.9929 668066.7819 + 0.9851 671361.8586 + 0.2164 VT+F+R8 -333430.6352 667973.2704 - 0.0000 668166.2249 - 0.0000 671439.3934 - 0.0000 VT+F+R7 -333440.5156 667989.0312 - 0.0000 668180.4820 - 0.0000 671442.6862 - 0.0000 VT+F+R6 -333479.8075 668063.6150 - 0.0000 668253.5690 - 0.0000 671504.8019 - 0.0000 PMB+F+R9 -333492.9227 668101.8454 - 0.0000 668296.3105 - 0.0000 671580.4365 - 0.0000 PMB+F+R10 -333490.6041 668101.2082 - 0.0000 668297.1907 - 0.0000 671592.2674 - 0.0000 Blosum62+F+R7 -333533.4493 668174.8986 - 0.0000 668366.3494 - 0.0000 671628.5536 - 0.0000 Blosum62+F+R8 -333528.3956 668168.7912 - 0.0000 668361.7457 - 0.0000 671634.9142 - 0.0000 PMB+F+R8 -333537.9987 668187.9974 - 0.0000 668380.9519 - 0.0000 671654.1204 - 0.0000 PMB+F+R7 -333547.2687 668202.5374 - 0.0000 668393.9882 - 0.0000 671656.1924 - 0.0000 Blosum62+F+R6 -333579.8386 668263.6772 - 0.0000 668453.6312 - 0.0000 671704.8641 - 0.0000 PMB+F+R6 -333591.6742 668287.3484 - 0.0000 668477.3024 - 0.0000 671728.5353 - 0.0000 VT+F+R5 -333622.2047 668344.4094 - 0.0000 668532.8733 - 0.0000 671773.1282 - 0.0000 Blosum62+F+R5 -333725.1574 668550.3148 - 0.0000 668738.7787 - 0.0000 671979.0336 - 0.0000 PMB+F+R5 -333735.7647 668571.5294 - 0.0000 668759.9933 - 0.0000 672000.2482 - 0.0000 VT+F+R4 -333890.6306 668877.2612 - 0.0000 669064.2419 - 0.0000 672293.5119 - 0.0000 PMB+F+R4 -334002.0151 669100.0302 - 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0.0000 710418.6059 - 0.0000 713515.5297 - 0.0000 mtMet+F -354606.8066 710297.6132 - 0.0000 710480.1852 - 0.0000 713676.4597 - 0.0000 mtART+R5 -354733.8198 710529.6396 - 0.0000 710704.2869 - 0.0000 713839.9118 - 0.0000 HIVw+R5 -354759.5006 710581.0012 - 0.0000 710755.6485 - 0.0000 713891.2734 - 0.0000 mtZOA+F+I -354969.7095 711025.4190 - 0.0000 711208.7215 - 0.0000 714410.4996 - 0.0000 HIVw+R4 -355118.5484 711295.0968 - 0.0000 711468.3251 - 0.0000 714592.9009 - 0.0000 mtVer+R7 -355118.4999 711306.9998 - 0.0000 711484.5052 - 0.0000 714642.2081 - 0.0000 mtVer+R8 -355114.3876 711302.7752 - 0.0000 711481.7198 - 0.0000 714650.4516 - 0.0000 mtART+R4 -355170.2956 711398.5912 - 0.0000 711571.8195 - 0.0000 714696.3953 - 0.0000 mtVer+R6 -355176.8264 711419.6528 - 0.0000 711595.7258 - 0.0000 714742.3930 - 0.0000 mtREV+R2 -355241.7146 711533.4292 - 0.0000 711703.8396 - 0.0000 714806.2972 - 0.0000 HIVb+F -355301.4432 711686.8864 - 0.0000 711869.4584 - 0.0000 715065.7329 - 0.0000 mtVer+R5 -355376.0325 711814.0650 - 0.0000 711988.7123 - 0.0000 715124.3372 - 0.0000 HIVw+I+G4 -355499.3870 712048.7740 - 0.0000 712219.1844 - 0.0000 715321.6420 - 0.0000 HIVb+I -355681.4220 712410.8440 - 0.0000 712580.5541 - 0.0000 715677.4779 - 0.0000 mtART+I+G4 -355703.7348 712457.4696 - 0.0000 712627.8800 - 0.0000 715730.3376 - 0.0000 mtVer+R4 -355765.1415 712588.2830 - 0.0000 712761.5113 - 0.0000 715886.0871 - 0.0000 mtART+G4 -355814.3356 712676.6712 - 0.0000 712846.3813 - 0.0000 715943.3051 - 0.0000 HIVw+G4 -355880.5613 712809.1226 - 0.0000 712978.8327 - 0.0000 716075.7565 - 0.0000 HIVw+R3 -355873.6295 712801.2590 - 0.0000 712973.0750 - 0.0000 716086.5950 - 0.0000 mtART+R3 -356159.9505 713373.9010 - 0.0000 713545.7170 - 0.0000 716659.2370 - 0.0000 mtZOA+F -356113.5127 713311.0254 - 0.0000 713493.5974 - 0.0000 716689.8719 - 0.0000 FLU -356201.6055 713449.2110 - 0.0000 713618.2224 - 0.0000 716709.6109 - 0.0000 mtVer+R3 -356615.3414 714284.6828 - 0.0000 714456.4988 - 0.0000 717570.0188 - 0.0000 mtVer+I+G4 -356707.7897 714465.5794 - 0.0000 714635.9898 - 0.0000 717738.4474 - 0.0000 mtVer+G4 -356859.0570 714766.1140 - 0.0000 714935.8241 - 0.0000 718032.7479 - 0.0000 HIVb -357211.3434 715468.6868 - 0.0000 715637.6982 - 0.0000 718729.0867 - 0.0000 mtMAM+R10 -357907.2310 716896.4620 - 0.0000 717078.3051 - 0.0000 720269.0745 - 0.0000 mtMAM+R9 -357952.8332 716983.6664 - 0.0000 717164.0569 - 0.0000 720343.8108 - 0.0000 mtMAM+R8 -358016.9571 717107.9142 - 0.0000 717286.8588 - 0.0000 720455.5906 - 0.0000 mtMAM+R7 -358123.4912 717316.9824 - 0.0000 717494.4878 - 0.0000 720652.1907 - 0.0000 mtMAM+R6 -358366.2755 717798.5510 - 0.0000 717974.6240 - 0.0000 721121.2912 - 0.0000 mtVer+F+I -358364.4053 717814.8106 - 0.0000 717998.1131 - 0.0000 721199.8912 - 0.0000 HIVw+R2 -358551.8400 718153.6800 - 0.0000 718324.0904 - 0.0000 721426.5480 - 0.0000 mtMAM+R5 -358703.4092 718468.8184 - 0.0000 718643.4657 - 0.0000 721779.0906 - 0.0000 mtART+R2 -358728.4647 718506.9294 - 0.0000 718677.3398 - 0.0000 721779.7974 - 0.0000 mtART+F+I -358915.8987 718917.7974 - 0.0000 719101.0999 - 0.0000 722302.8780 - 0.0000 HIVw+F+I -359015.0484 719116.0968 - 0.0000 719299.3993 - 0.0000 722501.1774 - 0.0000 mtMAM+R4 -359150.5281 719359.0562 - 0.0000 719532.2845 - 0.0000 722656.8603 - 0.0000 mtVer+R2 -359359.4879 719768.9758 - 0.0000 719939.3862 - 0.0000 723041.8438 - 0.0000 mtMAM+I+G4 -359559.8623 720169.7246 - 0.0000 720340.1350 - 0.0000 723442.5926 - 0.0000 mtMAM+G4 -359651.2913 720350.5826 - 0.0000 720520.2927 - 0.0000 723617.2165 - 0.0000 mtVer+F -359707.0231 720498.0462 - 0.0000 720680.6182 - 0.0000 723876.8927 - 0.0000 mtART+F -359948.3682 720980.7364 - 0.0000 721163.3084 - 0.0000 724359.5829 - 0.0000 mtMAM+R3 -360436.2165 721926.4330 - 0.0000 722098.2490 - 0.0000 725211.7690 - 0.0000 HIVw+F -360637.2557 722358.5114 - 0.0000 722541.0834 - 0.0000 725737.3579 - 0.0000 mtMAM+F+I -362568.1906 726222.3812 - 0.0000 726405.6837 - 0.0000 729607.4618 - 0.0000 mtMAM+R2 -363169.4115 727388.8230 - 0.0000 727559.2334 - 0.0000 730661.6910 - 0.0000 mtMAM+F -363585.2446 728254.4892 - 0.0000 728437.0612 - 0.0000 731633.3357 - 0.0000 mtZOA+I -364845.8633 730739.7266 - 0.0000 730909.4367 - 0.0000 734006.3605 - 0.0000 mtZOA -365893.6003 732833.2006 - 0.0000 733002.2120 - 0.0000 736093.6005 - 0.0000 mtInv+I -366179.3803 733406.7606 - 0.0000 733576.4707 - 0.0000 736673.3945 - 0.0000 mtREV+I -366208.3843 733464.7686 - 0.0000 733634.4787 - 0.0000 736731.4025 - 0.0000 mtMet+I -366391.3519 733830.7038 - 0.0000 734000.4139 - 0.0000 737097.3377 - 0.0000 mtREV -367084.5961 735215.1922 - 0.0000 735384.2036 - 0.0000 738475.5921 - 0.0000 HIVw+I -367172.7347 735393.4694 - 0.0000 735563.1795 - 0.0000 738660.1033 - 0.0000 mtInv -367286.9996 735619.9992 - 0.0000 735789.0106 - 0.0000 738880.3991 - 0.0000 mtMet -367538.8497 736123.6994 - 0.0000 736292.7108 - 0.0000 739384.0993 - 0.0000 HIVw -369063.2018 739172.4036 - 0.0000 739341.4150 - 0.0000 742432.8035 - 0.0000 mtART+I -371994.2746 745036.5492 - 0.0000 745206.2593 - 0.0000 748303.1831 - 0.0000 mtVer+I -372112.1979 745272.3958 - 0.0000 745442.1059 - 0.0000 748539.0297 - 0.0000 mtART -372968.9002 746983.8004 - 0.0000 747152.8118 - 0.0000 750244.2003 - 0.0000 mtVer -373451.5109 747949.0218 - 0.0000 748118.0332 - 0.0000 751209.4217 - 0.0000 mtMAM+I -377178.4699 755404.9398 - 0.0000 755574.6499 - 0.0000 758671.5737 - 0.0000 mtMAM -378202.6901 757451.3802 - 0.0000 757620.3916 - 0.0000 760711.7801 - 0.0000 AIC, w-AIC : Akaike information criterion scores and weights. AICc, w-AICc : Corrected AIC scores and weights. BIC, w-BIC : Bayesian information criterion scores and weights. Plus signs denote the 95% confidence sets. Minus signs denote significant exclusion. SUBSTITUTION PROCESS -------------------- Model of substitution: VT+F+R9 State frequencies: (empirical counts from alignment) pi(A) = 0.0527 pi(R) = 0.0573 pi(N) = 0.0415 pi(D) = 0.0521 pi(C) = 0.0197 pi(Q) = 0.0383 pi(E) = 0.0483 pi(G) = 0.0570 pi(H) = 0.0286 pi(I) = 0.0608 pi(L) = 0.1025 pi(K) = 0.0641 pi(M) = 0.0275 pi(F) = 0.0489 pi(P) = 0.0486 pi(S) = 0.0781 pi(T) = 0.0501 pi(W) = 0.0265 pi(Y) = 0.0398 pi(V) = 0.0576 Model of rate heterogeneity: FreeRate with 9 categories Site proportion and rates: (0.0224,0.0457) (0.0249,0.1752) (0.0414,0.3201) (0.0783,0.5019) (0.1161,0.7169) (0.1832,0.9032) (0.2008,1.0316) (0.2371,1.3003) (0.0957,1.8578) Category Relative_rate Proportion 1 0.0457 0.0224 2 0.1752 0.0249 3 0.3201 0.0414 4 0.5019 0.0783 5 0.7169 0.1161 6 0.9032 0.1832 7 1.0316 0.2008 8 1.3003 0.2371 9 1.8578 0.0957 MAXIMUM LIKELIHOOD TREE ----------------------- **NOTE**: Consensus tree has higher likelihood than ML tree found! Please use consensus tree below. Log-likelihood of the tree: -332838.5977 (s.e. 9109.6612) Unconstrained log-likelihood (without tree): -29163.3603 Number of free parameters (#branches + #model parameters): 558 Akaike information criterion (AIC) score: 666793.1954 Corrected Akaike information criterion (AICc) score: 666987.6605 Bayesian information criterion (BIC) score: 670271.7865 Total tree length (sum of branch lengths): 283.8828 Sum of internal branch lengths: 93.4272 (32.9105% of tree length) NOTE: Tree is UNROOTED although outgroup taxon 'QCF24445_Entomophthora_mu' is drawn at root Numbers in parentheses are ultrafast bootstrap support (%) +---QCF24445_Entomophthora_mu | +---QCF24447_Entomophthora_mu | | +------QCF24450_Entomophthora_mu +-----| (100) | +--------QCF24446_Entomophthora_mu +--| (93) | +------QCF24451_Entomophthora_mu | +--| (92) | | +------------QIC51112_Fusarium_oxyspor | +--| (99) | | | +---QED55404_Heterobasidion_m | | | +--| (100) | | | | +---AQM32767_Agaricus_bisporu | | +--| (93) | | +------QCF24448_Entomophthora_mu +--| (94) | +--QED55406_Heterobasidion_m | +--| (100) | | +--QED55412_Heterobasidion_m | +-----| (100) | | +--AIF33766_Heterobasidion_m | +--| (23) | | | +--------CCG47524.1_Clitocybe_odor | | +--| (59) | | +------QDW65421_Rhizoctonia_sola | +--| (75) | | | +-------QDW65415_Rhizoctonia_sola | | +--| (10) | | | +--QDW65422_Rhizoctonia_sola | | +---| (95) | | | +------AVA17452_Gigaspora_margar | | +------| (100) | | +-------------------AVA17451_Gigaspora_margar | +--| (71) | | | +----AVA17449_Gigaspora_margar | | | +---| (100) | | | | +----------QCF24449_Entomophthora_mu | | +--| (74) | | | +------------DAB41741_Azolla_filiculoi | | | +--| (74) | | | | | +---AVH76945_Beta_vulgaris_mi | | | | | +--| (100) | | | | | | | +--DAB41746_Cannabis_sativa_ | | | | | | | +--| (100) | | | | | | | | +--DAB41749_Humulus_lupulus_ | | | | | | | +--| (100) | | | | | | | | +---DAB41745_Oxybasis_rubra_m | | | | | | +--| (100) | | | | | | | +--AWL21855_Chenopodium_quin | | | | | | +--| (100) | | | | | | | +--DAB41744_Petunia_exserta_ | | | | | | +--| (100) | | | | | | +--DAB41743_Solanum_chacoens | | | | +----| (100) | | | | +-----DAB41747_Dahlia_pinnata_m | | +--| (74) | | +--------------AXY40444_Rhizophagus_irre | +--| (83) | | | +-----------QNN89183_Ceratobasidium_m | | +--| (75) | | | +--CAJ32467_Ophiostoma_mitov | | | +--| (100) | | | | +--AGT55876_Ophiostoma_mitov | | | +-----| (100) | | | | +----CAJ32466_Ophiostoma_mitov | | +--| (80) | | +----------AEG79311_Tuber_aestivum_m | +--| (78) | | +-----------------AVA17450_Gigaspora_margar | +--| (79) | | | +---CEZ26298_Botrytis_cinerea | | | +--| (79) | | | | | +--BBG56022_Fusarium_boothii | | | | | +--| (80) | | | | | | +---------AZP53928_Nigrospora_oryza | | | | +--| (79) | | | | +----BAV56291_Fusarium_poae_mi | | | +---| (100) | | | | | +----QDB74990_Alternaria_alter | | | | +--| (100) | | | | +--QDB74989_Epicoccum_nigrum | | +--| (100) | | +----------QDW65413_Rhizoctonia_sola | +--| (90) | | | +-----BAV56292_Fusarium_poae_mi | | | +--| (99) | | | | | +--AGC24232_Sclerotinia_scle | | | | | +--| (100) | | | | | | +--ANJ77670_Sclerotinia_niva | | | | | +--| (100) | | | | | | +--AHX84133_Sclerotinia_scle | | | | +--| (100) | | | | +---AAO21337_Sclerotinia_homo | | +--| (95) | | | +----QMU24933_Botryosphaeria_d | | | +--| (100) | | | | +-----1QDB74992_Neofusicoccum_p | | | +--| (99) | | | | | +--------AHY03257_Buergenerula_spa | | | | +--| (100) | | | | +--------QDW65424_Rhizoctonia_sola | | | +--| (100) | | | | | +--AIT71973_Rhizoctonia_cere | | | | +-------| (100) | | | | | +----QDW65416_Rhizoctonia_sola | | | | +--| (100) | | | | +---QDW65417_Rhizoctonia_sola | | +--| (89) | | | +--ABQ65153_Botrytis_cinerea | | +--------| (100) | | +--CAJ32468_Ophiostoma_mitov | +--| (54) | | | +--QDW65458_Rhizoctonia_sola | | | +--| (100) | | | | +--QIS79099_Rhizoctonia_sola | | | +--| (100) | | | | +--AOX47577_Ceratobasidium_m | | | +--| (100) | | | | +---QDW65420_Rhizoctonia_sola | | | +---| (100) | | | | | +--AHL25281_Rhizoctonia_mito | | | | +--| (100) | | | | +---ANA08076_Rhizoctonia_oryz | | | +--| (58) | | | | | +---QDM55307_Geopora_sumneria | | | | +-----| (100) | | | | +-----AEP83726_Tuber_excavatum_ | | +--| (94) | | +------------BAJ23143_Rhizophagus_sp_R | +--| (98) | | | +----URG16940.1_Narnaviridae_s | | | +----------| (100) | | | | +-----URG16646.1_Mitoviridae_sp | | | +--| (64) | | | | | +--URG16847.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16948.1_Narnaviridae_s | | | | | +--| (100) | | | | | | +---URG16946.1_Narnaviridae_s | | | | +--| (69) | | | | | +--URG16840.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16767.1_Mitoviridae_sp | | | | | +--| (92) | | | | | | | +--URG16844.1_Mitoviridae_sp | | | | | | | +--| (97) | | | | | | | | +--URG16943.1_Narnaviridae_s | | | | | | | +--| (92) | | | | | | | | +--URG16808.1_Mitoviridae_sp | | | | | | +--| (99) | | | | | | | +--URG16766.1_Mitoviridae_sp | | | | | | +--| (100) | | | | | | +--URG16938.1_Narnaviridae_s | | | | | +--| (100) | | | | | | +--URG16832.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | | +--URG16945.1_Narnaviridae_s | | | | | | +--| (99) | | | | | | +--URG16787.1_Mitoviridae_sp | | | | | +--| (76) | | | | | | | +--URG16780.1_Mitoviridae_sp | | | | | | | +--| (100) | | | | | | | | +--URG16926.1_Narnaviridae_s | | | | | | +--| (100) | | | | | | | +--URG16549.1_Mitoviridae_sp | | | | | | | +--| (100) | | | | | | | | +--URG16687.1_Mitoviridae_sp | | | | | | | +--| (100) | | | | | | | | +--URG16929.1_Narnaviridae_s | | | | | | +--| (100) | | | | | | | +--URG16846.1_Mitoviridae_sp | | | | | | +--| (100) | | | | | | +--URG16793.1_Mitoviridae_sp | | | | +--| (100) | | | | | +--URG16848.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16860.1_Mitoviridae_sp | | | | +--| (100) | | | | +--URG16859.1_Mitoviridae_sp | | | +--| (47) | | | | | +--URG16805.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16879.1_Mitoviridae_sp | | | | +--| (100) | | | | | +--URG16867.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16778.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16941.1_Narnaviridae_s | | | | +--| (100) | | | | | +--URG16865.1_Mitoviridae_sp | | | | +--| (100) | | | | | +--URG16869.1_Mitoviridae_sp | | | | | +--| (67) | | | | | | +--URG16823.1_Mitoviridae_sp | | | | +--| (100) | | | | | +--URG16801.1_Mitoviridae_sp | | | | +--| (67) | | | | +--URG16794.1_Mitoviridae_sp | | | +--| (41) | | | | | +--URG16762.1_Mitoviridae_sp | | | | | +--| (38) | | | | | | +--URG16777.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +-----ASM94097.1_Barns_Ness_ser | | | | +--| (100) | | | | +---URG16852.1_Mitoviridae_sp | | | +--| (69) | | | | | +--URG16830.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16806.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | | +--URG16862.1_Mitoviridae_sp | | | | | | +--| (100) | | | | | | +--URG16546.1_Mitoviridae_sp | | | | | +--| (91) | | | | | | | +--URG16854.1_Mitoviridae_sp | | | | | | | +--| (100) | | | | | | | | | +--URG16931.1_Narnaviridae_s | | | | | | | | +--| (100) | | | | | | | | +--URG16866.1_Mitoviridae_sp | | | | | | | +--| (100) | | | | | | | | +--URG16838.1_Mitoviridae_sp | | | | | | +--| (64) | | | | | | | +--URG16763.1_Mitoviridae_sp | | | | | | | +--| (100) | | | | | | | | +--URG16760.1_Mitoviridae_sp | | | | | | | +--| (95) | | | | | | | | | +--URG16776.1_Mitoviridae_sp | | | | | | | | +--| (95) | | | | | | | | +---Jiangsu_sediment_mitolike | | | | | | | +--| (96) | | | | | | | | +--URG16756.1_Mitoviridae_sp | | | | | | | +--| (74) | | | | | | | | +--URG16789.1_Mitoviridae_sp | | | | | | | +--| (70) | | | | | | | | | +--URG16858.1_Mitoviridae_sp | | | | | | | | +--| (100) | | | | | | | | +--URG16841.1_Mitoviridae_sp | | | | | | +--| (88) | | | | | | | +--URG16771.1_Mitoviridae_sp | | | | | | | +--| (86) | | | | | | | | +--URG16800.1_Mitoviridae_sp | | | | | | | +--| (99) | | | | | | | | +--URG16770.1_Mitoviridae_sp | | | | | | | +--| (100) | | | | | | | | | +--URG16753.1_Mitoviridae_sp | | | | | | | | | +--| (100) | | | | | | | | | | +--URG16798.1_Mitoviridae_sp | | | | | | | | | +--| (100) | | | | | | | | | | +--URG16791.1_Mitoviridae_sp | | | | | | | | +--| (99) | | | | | | | | +-----URG16797.1_Mitoviridae_sp | | | | | | | +--| (83) | | | | | | | | +--URG16752.1_Mitoviridae_sp | | | | | | +--| (53) | | | | | | | +--URG16829.1_Mitoviridae_sp | | | | | | +--| (72) | | | | | | +--URG16831.1_Mitoviridae_sp | | | | | +--| (99) | | | | | | +--URG16764.1_Mitoviridae_sp | | | | +--| (72) | | | | +------URG16782.1_Mitoviridae_sp | | | +--| (57) | | | | | +--URG16861.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16820.1_Mitoviridae_sp | | | | +--| (99) | | | | | +--URG16870.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16864.1_Mitoviridae_sp | | | | | +--| (42) | | | | | | | +--URG16868.1_Mitoviridae_sp | | | | | | +--| (30) | | | | | | +--URG16878.1_Mitoviridae_sp | | | | +--| (100) | | | | +--URG16792.1_Mitoviridae_sp | | | +--| (100) | | | | +----URG16755.1_Mitoviridae_sp | | | +--| (99) | | | | | +-----GICG01006928.1_Austropota | | | | +--| (100) | | | | | +---URG16540.1_Mitoviridae_sp | | | | | +--| (99) | | | | | | +---URG16842.1_Mitoviridae_sp | | | | +--| (98) | | | | +---URG16937.1_Narnaviridae_s | | | +--| (83) | | | | | +--ASM94068.1_Barns_Ness_bre | | | | | +------| (100) | | | | | | +--ASM94067.1_Barns_Ness_bre | | | | | +--| (96) | | | | | | +--GIIM01102748.1_Gigantidas | | | | +--------| (100) | | | | +----URG16828.1_Mitoviridae_sp | | | +--| (37) | | | | | +---------UHK03164.1_Hangzhou_mitov | | | | +--| (38) | | | | | +---QIS88020.1_de_Lozier_viru | | | | | +--| (100) | | | | | | +-----QQM16317.1_Jansystermes_v | | | | +------| (100) | | | | | +--ASM94066.1_Barns_Ness_bre | | | | +--| (100) | | | | +----YP009333146.1_Beihai_narn | | | +--| (34) | | | | | +-------Ansystermes_virus | | | | | +-------| (100) | | | | | | | +--Monsystermes_virus | | | | | | | +---| (100) | | | | | | | | +--Mansystermes_virus | | | | | | +--| (94) | | | | | | | +--Smith_virus | | | | | | +--| (99) | | | | | | +---Lilsebastian_narnalike_vi | | | | +--| (63) | | | | | +--URG16874.1_Mitoviridae_sp | | | | +---------| (100) | | | | | +--URG16786.1_Mitoviridae_sp | | | | +--| (97) | | | | | +--QDH88794.1_Mitovirus_sp | | | | +--| (100) | | | | +--URG16758.1_Mitoviridae_sp | | | +--| (52) | | | | +-----------------UJQ92550.1_Mitoviridae_sp | | | +--| (65) | | | | | +----------UUW21442.1_Sanya_mito_lik | | | | +--| (79) | | | | +------------GEAB01124828.1_Psammomys_ | | | +--| (75) | | | | | +-----------GIUT01051606.1_Polycarpa_ | | | | +----| (100) | | | | | +--Guangdong_mitolike_virus_ | | | | | +----| (100) | | | | | | +---Yunnan_sediment_mitolike_ | | | | +--| (100) | | | | | +--Guangxi_mitolike_virus_11 | | | | | +--| (100) | | | | | | +--Sichuan_sediment_mitolike | | | | | +--| (100) | | | | | | +--Sichua_sediment_mitolike_ | | | | | +--| (89) | | | | | | | +--Guangx_mitolike_virus_5_k | | | | | | +----| (100) | | | | | | +--Henan_mitolike_virus_15_k | | | | +--| (92) | | | | | +--Guangxi_mitolike_9_306R-k | | | | | +--| (100) | | | | | | +--Henan_mitolike_virus_3_k1 | | | | | +--| (100) | | | | | | +--Melbourne_fly_narnavirus_ | | | | +--| (77) | | | | +-----Heilongjiang_sediment_mit | | | +--| (74) | | | | | +---------------URG16542.1_Mitoviridae_sp | | | | +--| (69) | | | | | +--------La_Roche_virus | | | | | +--| (99) | | | | | | | +--------------QQM16292.1_Konsystermes_v | | | | | | | +--| (100) | | | | | | | | +---Mitovirus_JS5 | | | | | | | +---| (100) | | | | | | | | | +--QIS88017.1_le_Maire_virus | | | | | | | | | +---| (100) | | | | | | | | | | | +--QIS88049.1_de_Nodal_virus | | | | | | | | | | +--| (100) | | | | | | | | | | +--Schouten_virus | | | | | | | | +--| (99) | | | | | | | | | +--QIJ70072.1_Wyatt_narna_li | | | | | | | | | +--| (100) | | | | | | | | | | +--URG16809.1_Mitoviridae_sp | | | | | | | | +--| (99) | | | | | | | | +---------Mensystermes_virus | | | | | | +--| (100) | | | | | | +----------QIS87961.1_Halley_virus | | | | +--| (100) | | | | +------------Punsystermes_virus | | | +--| (93) | | | | | +---------QIS87963.1_Kagge_virus | | | | | +--| (93) | | | | | | +----------QIS88016.1_Biscoe_virus | | | | +---------| (100) | | | | | +--GFTX01082149.1_Ulva_lactu | | | | | +------| (100) | | | | | | +---HBWR010342209.1_Aplysina_ | | | | +--| (99) | | | | | +--QIJ70059.1_Orin_narna-lik | | | | | +---| (100) | | | | | | | +--URG16528.1_Leviviridae_sp | | | | | | +--| (100) | | | | | | +--QIJ70060.1_Orin_narna_lik | | | | +-------| (100) | | | | +--URG15843.1_Leviviridae_sp | | | +--| (97) | | | | | +-------Saccharomyces_20S_RNA_nar | | | | +--------------------| (100) | | | | +---------Saccharomyces_23S_RNA_nar | | +--| (79) | | | +---------DAZ90600_Halichondria_pan | | | +---| (100) | | | | +------DAZ90602_Halisarca_dujard | | | +--| (76) | | | | +-------------DAZ90604_Henricia_sp_mito | | | +--| (84) | | | | | +----------DAZ90603_Calvadosia_cruxm | | | | +--| (70) | | | | +-------------------DAZ90601_Halichondria_pan | | | +--| (98) | | | | | +-----------DAZ90606_Nebalia_bipes_mi | | | | +--| (98) | | | | | +----APG77262_Wenling_narna_li | | | | +---| (100) | | | | | +-----DAZ90609_Egaenus_convexus | | | | +--| (91) | | | | | +-----QNM37825_Thrips_tabaci_as | | | | | +--| (100) | | | | | | | +--DAD49837_Lutzomyia_longip | | | | | | +--| (100) | | | | | | | +---QIR30279_Plasmopara_vitic | | | | | | +--| (100) | | | | | | +--QQP18722_Soybean_thrips_m | | | | +--| (93) | | | | | +--QQM16246_Lunsystermes_vir | | | | | +--| (87) | | | | | | +--QQM16245_Rinsystermes_vir | | | | | +--| (41) | | | | | | +--MW052093_Wunsystermes_vir | | | | | +--| (100) | | | | | | +--QQM16244_Kensystermes_vir | | | | | +--| (100) | | | | | | +--DAZ90604_Hanseniella_sp_m | | | | | +--| (100) | | | | | | +------DAZ90605_Tigriopus_califo | | | | +--| (92) | | | | +----DAZ90607_Glomeridella_min | | +--| (84) | | | +------------------------GIFJ01468976.1_Halichondr | | +--| (86) | | | +---MW648461.1_Grapevine-asso | | | +--| (100) | | | | | +---QXN75365.1_Grapevine_asso | | | | +--| (100) | | | | +---QXN75364.1_Grapevine_asso | | | +--| (100) | | | | | +----YP_010799133.1_Ophiostoma | | | | +--| (100) | | | | +---ON929979.1_Hymenoscyphus_ | | | +--| (99) | | | | +---MW648460.1_Grapevine-asso | | | +--| (99) | | | | | +**UNG44319.1_Fusarium_asiat | | | | +-----| (100) | | | | +**MZ969057.1_Fusarium_asiat | | +-------| (100) | | | +--MN034141.1_Mitovirus_sp | | +---| (100) | | +--MN035528.1_Mitovirus_sp | +--| (97) | | | +--AKN79252_Alternaria_brass | | | +--| (100) | | | | +--BAV53122_Alternaria_arbor | | | +--| (100) | | | | +----AAN05635_Gremmeniella_mit | | | +--| (100) | | | | | +--QPK91779_Fusarium_andiyaz | | | | | +--| (100) | | | | | | +---BAV56289_Fusarium_poae_mi | | | | +--| (100) | | | | | +--QPK91778_Fusarium_vertici | | | | +--| (100) | | | | +--AZP53929_Nigrospora_oryza | | | +--| (98) | | | | | +--BAQ36629_Fusarium_globosu | | | | | +--| (100) | | | | | | | +**AHI43534_Fusarium_circina | | | | | | +--| (100) | | | | | | +**AHI43533_Fusarium_circina | | | | | +--| (99) | | | | | | +--BAQ36630_Fusarium_coerule | | | | | +--| (100) | | | | | | +--BAV56290_Fusarium_poae_mi | | | | | +--| (100) | | | | | | +--AAT09164_Thielaviopsis_ba | | | | | +--| (77) | | | | | | | +--AGC24233_Sclerotinia_scle | | | | | | | +--| (100) | | | | | | | | | +--CEZ26303_Botrytis_cinerea | | | | | | | | +--| (100) | | | | | | | | +--ANJ77669_Sclerotinia_niva | | | | | | +--| (99) | | | | | | +---AVZ65960_Leptosphaeria_bi | | | | +--| (100) | | | | | +--QNS28825_Diaporthe_rudis_ | | | | +--| (100) | | | | | +--CEZ26297_Botrytis_cinerea | | | | +--| (100) | | | | +--AEX91878_Sclerotinia_scle | | +----| (100) | | +------S1AEY76153_Gremmeniella_a | +--| (75) | | | +------AMQ67414_Cronartium_ribic | | | +--| (99) | | | | | +------AMQ67417_Cronartium_ribic | | | | +--| (99) | | | | +--------AMQ67416_Cronartium_ribic | | +--| (69) | | | +--------AMQ67418_Cronartium_ribic | | | +--| (58) | | | | +------BAD72871_Helicobasidium_m | | | +--| (99) | | | | +--------AZY91986_Puccinia_striifo | | +--| (75) | | | +-------AMQ67415_Cronartium_ribic | | +--| (88) | | +----------DAC76947_Entomophthora_mu +--| (82) | +-----AHX84135S_clerotinia_scle | +--| (69) | | | +--AZG04290_Hymenoscyphus_fr | | +-----| (100) | | +--AIU44705_Hymenoscyphus_fr +--| (99) +---------------AEX91879_Sclerotinia_scle Tree in newick format: (QCF24445_Entomophthora_mu:0.6314971462,QCF24447_Entomophthora_mu:0.7024470259,(QCF24450_Entomophthora_mu:1.1327910444,(QCF24446_Entomophthora_mu:1.4656692757,(((QCF24451_Entomophthora_mu:1.2347803070,QIC51112_Fusarium_oxyspor:2.1123921292)92:0.5672533991,((QED55404_Heterobasidion_m:0.6835710517,AQM32767_Agaricus_bisporu:0.6942032579)100:0.5637867973,QCF24448_Entomophthora_mu:1.2315181885)93:0.3548811821)99:0.1847812103,((((((((((((((QED55406_Heterobasidion_m:0.0460367164,QED55412_Heterobasidion_m:0.0453620196)100:0.2502807221,AIF33766_Heterobasidion_m:0.3191963240)100:1.0111099140,(CCG47524.1_Clitocybe_odor:1.3909474074,QDW65421_Rhizoctonia_sola:1.1198749029)59:0.5436657896)23:0.1434978948,(QDW65415_Rhizoctonia_sola:1.3085820156,(QDW65422_Rhizoctonia_sola:0.6066737950,(AVA17452_Gigaspora_margar:1.1193092669,AVA17451_Gigaspora_margar:3.1176246742)100:1.2223141800)95:0.6253391817)10:0.2656462978)75:0.2276170317,((AVA17449_Gigaspora_margar:0.8053616019,QCF24449_Entomophthora_mu:1.8149794037)100:0.7018661692,((DAB41741_Azolla_filiculoi:2.0494572934,((AVH76945_Beta_vulgaris_mi:0.7340298047,(((DAB41746_Cannabis_sativa_:0.2612607218,DAB41749_Humulus_lupulus_:0.1691563671)100:0.3808855506,DAB41745_Oxybasis_rubra_m:0.6868803417)100:0.1301485931,(AWL21855_Chenopodium_quin:0.4362923593,(DAB41744_Petunia_exserta_:0.3886073539,DAB41743_Solanum_chacoens:0.3763129256)100:0.1377496933)100:0.2524637155)100:0.3665539857)100:0.5890437106,DAB41747_Dahlia_pinnata_m:1.0141422845)100:0.7839370603)74:0.4230159757,AXY40444_Rhizophagus_irre:2.3441956761)74:0.1347694998)74:0.1494134303)71:0.1934622504,(QNN89183_Ceratobasidium_m:1.8630567207,(((CAJ32467_Ophiostoma_mitov:0.0486784021,AGT55876_Ophiostoma_mitov:0.4129216504)100:0.5893765246,CAJ32466_Ophiostoma_mitov:0.8947993552)100:0.9314967798,AEG79311_Tuber_aestivum_m:1.7739848369)80:0.2844665431)75:0.1530644498)83:0.1204242833,AVA17450_Gigaspora_margar:2.8530123351)78:0.2036090934,(((CEZ26298_Botrytis_cinerea:0.7109851561,((BBG56022_Fusarium_boothii:0.4670176476,AZP53928_Nigrospora_oryza:1.5910000933)80:0.2572760944,BAV56291_Fusarium_poae_mi:0.8633925351)79:0.1228567267)79:0.0973746058,(QDB74990_Alternaria_alter:0.7827411957,QDB74989_Epicoccum_nigrum:0.5650293704)100:0.3768881374)100:0.6363887499,QDW65413_Rhizoctonia_sola:1.6999302445)100:0.5660861197)79:0.2637808342,((BAV56292_Fusarium_poae_mi:1.0145562200,(((AGC24232_Sclerotinia_scle:0.0148662215,ANJ77670_Sclerotinia_niva:0.0364374206)100:0.1878323965,AHX84133_Sclerotinia_scle:0.5547393009)100:0.3199988353,AAO21337_Sclerotinia_homo:0.6342839246)100:0.5747508799)99:0.3900652421,((((QMU24933_Botryosphaeria_d:0.8495913147,1QDB74992_Neofusicoccum_p:0.9315220862)100:0.3862407608,(AHY03257_Buergenerula_spa:1.5295274090,QDW65424_Rhizoctonia_sola:1.4109561764)100:0.4792464723)99:0.3327504806,(AIT71973_Rhizoctonia_cere:0.2734459735,(QDW65416_Rhizoctonia_sola:0.8426900921,QDW65417_Rhizoctonia_sola:0.6260382614)100:0.1267813089)100:1.3852093060)100:0.4028244434,(ABQ65153_Botrytis_cinerea:0.0233490537,CAJ32468_Ophiostoma_mitov:0.0237014749)100:1.5136789430)89:0.1518266653)95:0.3295636114)90:0.2814959230,((((((QDW65458_Rhizoctonia_sola:0.3115735089,QIS79099_Rhizoctonia_sola:0.2687174792)100:0.1151541494,AOX47577_Ceratobasidium_m:0.2827676337)100:0.5084440946,QDW65420_Rhizoctonia_sola:0.7136334060)100:0.2433357956,(AHL25281_Rhizoctonia_mito:0.4271700204,ANA08076_Rhizoctonia_oryz:0.6378720145)100:0.3986812266)100:0.6257726917,(QDM55307_Geopora_sumneria:0.6648524661,AEP83726_Tuber_excavatum_:0.9586149562)100:0.9809707069)58:0.4285969464,BAJ23143_Rhizophagus_sp_R:2.1271248146)94:0.4222696193)54:0.1247847672,((((((((((((((((((URG16940.1_Narnaviridae_s:0.7791616755,URG16646.1_Mitoviridae_sp:1.0451121307)100:1.8475286810,(((URG16847.1_Mitoviridae_sp:0.4541051402,URG16948.1_Narnaviridae_s:0.4772409499)100:0.2095126767,URG16946.1_Narnaviridae_s:0.7444552437)100:0.3306642850,((((((URG16840.1_Mitoviridae_sp:0.2586071195,URG16767.1_Mitoviridae_sp:0.4103497406)100:0.0446912723,(((URG16844.1_Mitoviridae_sp:0.3108594674,URG16943.1_Narnaviridae_s:0.1556508506)97:0.1036678088,URG16808.1_Mitoviridae_sp:0.1088605049)92:0.0169594743,(URG16766.1_Mitoviridae_sp:0.1120829144,URG16938.1_Narnaviridae_s:0.1050172452)100:0.0734572137)99:0.0521013200)92:0.0371979334,URG16832.1_Mitoviridae_sp:0.1328023673)100:0.1108870017,(URG16945.1_Narnaviridae_s:0.1598268066,URG16787.1_Mitoviridae_sp:0.1770803028)99:0.0588208443)100:0.3935423839,((URG16780.1_Mitoviridae_sp:0.2164844834,URG16926.1_Narnaviridae_s:0.3399084024)100:0.0929967689,(((URG16549.1_Mitoviridae_sp:0.2038267987,URG16687.1_Mitoviridae_sp:0.1823029617)100:0.0699405421,URG16929.1_Narnaviridae_s:0.2190373659)100:0.0775641322,(URG16846.1_Mitoviridae_sp:0.2385913649,URG16793.1_Mitoviridae_sp:0.3574746435)100:0.0324503003)100:0.1578566519)100:0.1927601271)76:0.0806985749,((URG16848.1_Mitoviridae_sp:0.2056820441,URG16860.1_Mitoviridae_sp:0.2323131891)100:0.1924400860,URG16859.1_Mitoviridae_sp:0.2571409968)100:0.0811182990)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systermes_v:2.4108387226,Mitovirus_JS5:0.7324578321)100:0.4063412257,((QIS88017.1_le_Maire_virus:0.4464762905,(QIS88049.1_de_Nodal_virus:0.2027476190,Schouten_virus:0.1714922542)100:0.3459186753)100:0.6696469480,((QIJ70072.1_Wyatt_narna_li:0.5177018420,URG16809.1_Mitoviridae_sp:0.5509785875)100:0.3796715749,Mensystermes_virus:1.5488667038)99:0.4191071742)99:0.5471716465)100:0.6895107152,QIS87961.1_Halley_virus:1.8014879408)100:0.3552558911)99:0.2480553801,Punsystermes_virus:2.0875451876)100:0.4834283972)69:0.2531583137)74:0.2275000618,((QIS87963.1_Kagge_virus:1.5666170757,QIS88016.1_Biscoe_virus:1.8415454347)93:0.3750103814,((GFTX01082149.1_Ulva_lactu:0.5114440573,HBWR010342209.1_Aplysina_:0.7301162029)100:1.1365411100,((QIJ70059.1_Orin_narna-lik:0.1600751137,(URG16528.1_Leviviridae_sp:0.2518282580,QIJ70060.1_Orin_narna_lik:0.4708911743)100:0.1056922126)100:0.7122541449,URG15843.1_Leviviridae_sp:0.5109665449)100:1.3270254280)99:0.3522157257)100:1.5595787110)93:0.4005334222,(Saccharomyces_20S_RNA_nar:1.3467374609,Saccharomyces_23S_RNA_nar:1.6681395889)100:3.2488901140)97:0.3998865817,(((((DAZ90600_Halichondria_pan:1.6161781708,DAZ90602_Halisarca_dujard:1.1813141956)100:0.6775422954,DAZ90604_Henricia_sp_mito:2.1680547584)76:0.3407249117,(DAZ90603_Calvadosia_cruxm:1.7437076264,DAZ90601_Halichondria_pan:3.1488755339)70:0.3749337952)84:0.4045899177,(DAZ90606_Nebalia_bipes_mi:1.8903593784,(APG77262_Wenling_narna_li:0.8757880419,(DAZ90609_Egaenus_convexus:0.9313356295,((QNM37825_Thrips_tabaci_as:0.9875728519,(DAD49837_Lutzomyia_longip:0.3213628924,(QIR30279_Plasmopara_vitic:0.7324104381,QQP18722_Soybean_thrips_m:0.4772504984)100:0.1276307722)100:0.4881318266)100:0.5701285270,((((((QQM16246_Lunsystermes_vir:0.2240491685,QQM16245_Rinsystermes_vir:0.3582424729)87:0.0992024320,MW052093_Wunsystermes_vir:0.4127060350)41:0.0633051214,QQM16244_Kensystermes_vir:0.3181445782)100:0.1904344666,DAZ90604_Hanseniella_sp_m:0.5028060663)100:0.5638121043,DAZ90605_Tigriopus_califo:1.1184731400)100:0.3442459857,DAZ90607_Glomeridella_min:0.9257091670)92:0.2548113319)93:0.4121877620)91:0.2495348736)100:0.7147596137)98:0.2834726288)98:0.5336512955,(GIFJ01468976.1_Halichondr:3.9649010366,(((((MW648461.1_Grapevine-asso:0.6308447997,(QXN75365.1_Grapevine_asso:0.6423725959,QXN75364.1_Grapevine_asso:0.7033478434)100:0.1822026880)100:0.1815621667,(YP_010799133.1_Ophiostoma:0.8577958243,ON929979.1_Hymenoscyphus_:0.7041983580)100:0.1775534881)100:0.1736833140,MW648460.1_Grapevine-asso:0.6512648043)99:0.4628043975,(UNG44319.1_Fusarium_asiat:0.0000020574,MZ969057.1_Fusarium_asiat:0.0000020574)100:1.0022627030)99:0.2049687263,(MN034141.1_Mitovirus_sp:0.3412170622,MN035528.1_Mitovirus_sp:0.4395966170)100:0.6321772795)100:1.3191550940)86:0.5885612228)84:0.2570026923)79:0.1761426051)98:0.3378556130,(((((AKN79252_Alternaria_brass:0.2512929013,BAV53122_Alternaria_arbor:0.3074197561)100:0.2151388392,AAN05635_Gremmeniella_mit:0.8860994389)100:0.2133333876,((QPK91779_Fusarium_andiyaz:0.4076200401,BAV56289_Fusarium_poae_mi:0.7262287692)100:0.4560046485,(QPK91778_Fusarium_vertici:0.4961908083,AZP53929_Nigrospora_oryza:0.5341512340)100:0.1550856009)100:0.1390888695)100:0.3934404818,((((((BAQ36629_Fusarium_globosu:0.1676112346,(AHI43534_Fusarium_circina:0.0000020574,AHI43533_Fusarium_circina:0.0000020574)100:0.1771791417)100:0.0936898064,BAQ36630_Fusarium_coerule:0.2285976952)99:0.0916213350,BAV56290_Fusarium_poae_mi:0.3323932321)100:0.3144807854,AAT09164_Thielaviopsis_ba:0.5637143473)100:0.4451128408,((AGC24233_Sclerotinia_scle:0.0946009209,(CEZ26303_Botrytis_cinerea:0.0107220283,ANJ77669_Sclerotinia_niva:0.0252663364)100:0.1635643185)100:0.4936904914,AVZ65960_Leptosphaeria_bi:0.7292522381)99:0.1948085496)77:0.1169513799,(QNS28825_Diaporthe_rudis_:0.5362267814,(CEZ26297_Botrytis_cinerea:0.1908418155,AEX91878_Sclerotinia_scle:0.2992816838)100:0.3884474789)100:0.3584218273)100:0.1565588899)98:0.2419283186,S1AEY76153_Gremmeniella_a:1.1865742296)100:0.7850648221)97:0.1880988767,((AMQ67414_Cronartium_ribic:1.2047965512,(AMQ67417_Cronartium_ribic:1.1630306228,AMQ67416_Cronartium_ribic:1.5438499076)99:0.4254299107)99:0.5963243068,(((AMQ67418_Cronartium_ribic:1.5348315054,BAD72871_Helicobasidium_m:1.2188726323)58:0.1516542614,AZY91986_Puccinia_striifo:1.4767016734)99:0.3126179647,(AMQ67415_Cronartium_ribic:1.3607804563,DAC76947_Entomophthora_mu:1.8091276854)88:0.1745052237)75:0.4128914272)69:0.1732899714)75:0.1794170803,((AHX84135S_clerotinia_scle:1.0081410897,(AZG04290_Hymenoscyphus_fr:0.0249812403,AIU44705_Hymenoscyphus_fr:0.0131594042)100:1.0615961850)69:0.3222406959,AEX91879_Sclerotinia_scle:2.5668854897)99:0.5770540261)82:0.1189143005)94:0.3071579949)93:0.1331630663)100:0.9509946279); CONSENSUS TREE -------------- Consensus tree is constructed from 1000bootstrap trees Log-likelihood of consensus tree: -332838.342457 Robinson-Foulds distance between ML tree and consensus tree: 12 Branches with support >0.000000% are kept (extended consensus) Branch lengths are optimized by maximum likelihood on original alignment Numbers in parentheses are bootstrap supports (%) +---QCF24445_Entomophthora_mu | +---QCF24447_Entomophthora_mu | | +------QCF24450_Entomophthora_mu +-----| (100) | +--------QCF24446_Entomophthora_mu +--| (93) | +------QCF24451_Entomophthora_mu | +--| (92) | | +------------QIC51112_Fusarium_oxyspor | +--| (99) | | | +---QED55404_Heterobasidion_m | | | +--| (100) | | | | +---AQM32767_Agaricus_bisporu | | +--| (93) | | +------QCF24448_Entomophthora_mu +--| (94) | +--QED55406_Heterobasidion_m | +--| (100) | | +--QED55412_Heterobasidion_m | +-----| (100) | | +--AIF33766_Heterobasidion_m | +--| (31) | | | +--QDW65422_Rhizoctonia_sola | | +---| (95) | | | +------AVA17452_Gigaspora_margar | | +-------| (100) | | +-------------------AVA17451_Gigaspora_margar | +--| (66) | | | +--------CCG47524.1_Clitocybe_odor | | +--| (59) | | +-----QDW65421_Rhizoctonia_sola | +--| (75) | | +--------QDW65415_Rhizoctonia_sola | +--| (71) | | | +----AVA17449_Gigaspora_margar | | | +---| (100) | | | | +----------QCF24449_Entomophthora_mu | | +--| (74) | | | +------------DAB41741_Azolla_filiculoi | | | +--| (74) | | | | | +---AVH76945_Beta_vulgaris_mi | | | | | +--| (100) | | | | | | | +--DAB41746_Cannabis_sativa_ | | | | | | | +--| (100) | | | | | | | | +--DAB41749_Humulus_lupulus_ | | | | | | | +--| (100) | | | | | | | | +---DAB41745_Oxybasis_rubra_m | | | | | | +--| (100) | | | | | | | +--AWL21855_Chenopodium_quin | | | | | | +--| (100) | | | | | | | +--DAB41744_Petunia_exserta_ | | | | | | +--| (100) | | | | | | +--DAB41743_Solanum_chacoens | | | | +----| (100) | | | | +-----DAB41747_Dahlia_pinnata_m | | +--| (74) | | +-------------AXY40444_Rhizophagus_irre | +--| (83) | | | +-----------QNN89183_Ceratobasidium_m | | +--| (75) | | | +--CAJ32467_Ophiostoma_mitov | | | +--| (100) | | | | +--AGT55876_Ophiostoma_mitov | | | +----| (100) | | | | +----CAJ32466_Ophiostoma_mitov | | +--| (80) | | +----------AEG79311_Tuber_aestivum_m | +--| (78) | | +-----------------AVA17450_Gigaspora_margar | +--| (79) | | | +---CEZ26298_Botrytis_cinerea | | | +--| (79) | | | | | +--BBG56022_Fusarium_boothii | | | | | +--| (80) | | | | | | +---------AZP53928_Nigrospora_oryza | | | | +--| (79) | | | | +----BAV56291_Fusarium_poae_mi | | | +---| (100) | | | | | +----QDB74990_Alternaria_alter | | | | +--| (100) | | | | +--QDB74989_Epicoccum_nigrum | | +--| (100) | | +---------QDW65413_Rhizoctonia_sola | +--| (90) | | | +-----BAV56292_Fusarium_poae_mi | | | +--| (99) | | | | | +--AGC24232_Sclerotinia_scle | | | | | +--| (100) | | | | | | +--ANJ77670_Sclerotinia_niva | | | | | +--| (100) | | | | | | +--AHX84133_Sclerotinia_scle | | | | +--| (100) | | | | +---AAO21337_Sclerotinia_homo | | +--| (95) | | | +----QMU24933_Botryosphaeria_d | | | +--| (100) | | | | +-----1QDB74992_Neofusicoccum_p | | | +--| (99) | | | | | +--------AHY03257_Buergenerula_spa | | | | +--| (100) | | | | +--------QDW65424_Rhizoctonia_sola | | | +--| (100) | | | | | +--AIT71973_Rhizoctonia_cere | | | | +-------| (100) | | | | | +----QDW65416_Rhizoctonia_sola | | | | +--| (100) | | | | +---QDW65417_Rhizoctonia_sola | | +--| (89) | | | +--ABQ65153_Botrytis_cinerea | | +--------| (100) | | +--CAJ32468_Ophiostoma_mitov | +--| (54) | | | +--QDW65458_Rhizoctonia_sola | | | +--| (100) | | | | +--QIS79099_Rhizoctonia_sola | | | +--| (100) | | | | +--AOX47577_Ceratobasidium_m | | | +--| (100) | | | | +---QDW65420_Rhizoctonia_sola | | | +---| (100) | | | | | +--AHL25281_Rhizoctonia_mito | | | | +--| (100) | | | | +---ANA08076_Rhizoctonia_oryz | | | +--| (58) | | | | | +---QDM55307_Geopora_sumneria | | | | +-----| (100) | | | | +-----AEP83726_Tuber_excavatum_ | | +--| (94) | | +------------BAJ23143_Rhizophagus_sp_R | +--| (98) | | | +----URG16940.1_Narnaviridae_s | | | +-----------| (100) | | | | +-----URG16646.1_Mitoviridae_sp | | | +--| (64) | | | | | +--URG16847.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16948.1_Narnaviridae_s | | | | | +--| (100) | | | | | | +---URG16946.1_Narnaviridae_s | | | | +--| (69) | | | | | +--URG16840.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16767.1_Mitoviridae_sp | | | | | +--| (92) | | | | | | | +--URG16844.1_Mitoviridae_sp | | | | | | | +--| (97) | | | | | | | | +--URG16943.1_Narnaviridae_s | | | | | | | +--| (92) | | | | | | | | +--URG16808.1_Mitoviridae_sp | | | | | | +--| (99) | | | | | | | +--URG16766.1_Mitoviridae_sp | | | | | | +--| (100) | | | | | | +--URG16938.1_Narnaviridae_s | | | | | +--| (100) | | | | | | +--URG16832.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | | +--URG16945.1_Narnaviridae_s | | | | | | +--| (99) | | | | | | +--URG16787.1_Mitoviridae_sp | | | | | +--| (76) | | | | | | | +--URG16780.1_Mitoviridae_sp | | | | | | | +--| (100) | | | | | | | | +--URG16926.1_Narnaviridae_s | | | | | | +--| (100) | | | | | | | +--URG16549.1_Mitoviridae_sp | | | | | | | +--| (100) | | | | | | | | +--URG16687.1_Mitoviridae_sp | | | | | | | +--| (100) | | | | | | | | +--URG16929.1_Narnaviridae_s | | | | | | +--| (100) | | | | | | | +--URG16846.1_Mitoviridae_sp | | | | | | +--| (100) | | | | | | +--URG16793.1_Mitoviridae_sp | | | | +--| (100) | | | | | +--URG16848.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16860.1_Mitoviridae_sp | | | | +--| (100) | | | | +--URG16859.1_Mitoviridae_sp | | | +--| (47) | | | | | +--URG16805.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16879.1_Mitoviridae_sp | | | | +--| (100) | | | | | +--URG16867.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16778.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16941.1_Narnaviridae_s | | | | +--| (100) | | | | | +--URG16865.1_Mitoviridae_sp | | | | +--| (100) | | | | | +--URG16869.1_Mitoviridae_sp | | | | | +--| (67) | | | | | | +--URG16823.1_Mitoviridae_sp | | | | +--| (100) | | | | | +--URG16801.1_Mitoviridae_sp | | | | +--| (67) | | | | +--URG16794.1_Mitoviridae_sp | | | +--| (41) | | | | | +--URG16762.1_Mitoviridae_sp | | | | | +--| (62) | | | | | | +----ASM94097.1_Barns_Ness_ser | | | | | +--| (100) | | | | | | +--URG16777.1_Mitoviridae_sp | | | | +--| (100) | | | | +---URG16852.1_Mitoviridae_sp | | | +--| (69) | | | | | +--URG16830.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16806.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | | +--URG16862.1_Mitoviridae_sp | | | | | | +--| (100) | | | | | | +--URG16546.1_Mitoviridae_sp | | | | | +--| (91) | | | | | | | +--URG16854.1_Mitoviridae_sp | | | | | | | +--| (100) | | | | | | | | | +--URG16931.1_Narnaviridae_s | | | | | | | | +--| (100) | | | | | | | | +--URG16866.1_Mitoviridae_sp | | | | | | | +--| (100) | | | | | | | | +--URG16838.1_Mitoviridae_sp | | | | | | +--| (64) | | | | | | | +--URG16763.1_Mitoviridae_sp | | | | | | | +--| (100) | | | | | | | | +--URG16760.1_Mitoviridae_sp | | | | | | | +--| (95) | | | | | | | | | +--URG16776.1_Mitoviridae_sp | | | | | | | | +--| (95) | | | | | | | | +---Jiangsu_sediment_mitolike | | | | | | | +--| (96) | | | | | | | | +--URG16756.1_Mitoviridae_sp | | | | | | | +--| (74) | | | | | | | | +--URG16789.1_Mitoviridae_sp | | | | | | | +--| (70) | | | | | | | | | +--URG16858.1_Mitoviridae_sp | | | | | | | | +--| (100) | | | | | | | | +--URG16841.1_Mitoviridae_sp | | | | | | +--| (88) | | | | | | | +--URG16771.1_Mitoviridae_sp | | | | | | | +--| (86) | | | | | | | | +--URG16800.1_Mitoviridae_sp | | | | | | | +--| (99) | | | | | | | | +--URG16770.1_Mitoviridae_sp | | | | | | | +--| (100) | | | | | | | | | +--URG16753.1_Mitoviridae_sp | | | | | | | | | +--| (100) | | | | | | | | | | +--URG16798.1_Mitoviridae_sp | | | | | | | | | +--| (100) | | | | | | | | | | +--URG16791.1_Mitoviridae_sp | | | | | | | | +--| (99) | | | | | | | | +-----URG16797.1_Mitoviridae_sp | | | | | | | +--| (83) | | | | | | | | +--URG16752.1_Mitoviridae_sp | | | | | | +--| (53) | | | | | | | +--URG16829.1_Mitoviridae_sp | | | | | | +--| (72) | | | | | | +--URG16831.1_Mitoviridae_sp | | | | | +--| (99) | | | | | | +--URG16764.1_Mitoviridae_sp | | | | +--| (72) | | | | +------URG16782.1_Mitoviridae_sp | | | +--| (57) | | | | | +--URG16861.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16820.1_Mitoviridae_sp | | | | +--| (99) | | | | | +--URG16870.1_Mitoviridae_sp | | | | | +--| (100) | | | | | | +--URG16864.1_Mitoviridae_sp | | | | | +--| (70) | | | | | | +--URG16868.1_Mitoviridae_sp | | | | | +--| (58) | | | | | | +--URG16792.1_Mitoviridae_sp | | | | +--| (100) | | | | +--URG16878.1_Mitoviridae_sp | | | +--| (100) | | | | +----URG16755.1_Mitoviridae_sp | | | +--| (99) | | | | | +-----GICG01006928.1_Austropota | | | | +--| (100) | | | | | +---URG16540.1_Mitoviridae_sp | | | | | +--| (99) | | | | | | +---URG16842.1_Mitoviridae_sp | | | | +--| (98) | | | | +---URG16937.1_Narnaviridae_s | | | +--| (83) | | | | | +--ASM94068.1_Barns_Ness_bre | | | | | +------| (100) | | | | | | +--ASM94067.1_Barns_Ness_bre | | | | | +--| (96) | | | | | | +--GIIM01102748.1_Gigantidas | | | | +--------| (100) | | | | +----URG16828.1_Mitoviridae_sp | | | +--| (37) | | | | | +---------UHK03164.1_Hangzhou_mitov | | | | +--| (38) | | | | | +---QIS88020.1_de_Lozier_viru | | | | | +--| (100) | | | | | | +-----QQM16317.1_Jansystermes_v | | | | +------| (100) | | | | | +--ASM94066.1_Barns_Ness_bre | | | | +--| (100) | | | | +----YP009333146.1_Beihai_narn | | | +--| (34) | | | | | +-------Ansystermes_virus | | | | | +-------| (100) | | | | | | | +--Monsystermes_virus | | | | | | | +---| (100) | | | | | | | | +--Mansystermes_virus | | | | | | +--| (94) | | | | | | | +--Smith_virus | | | | | | +--| (99) | | | | | | +---Lilsebastian_narnalike_vi | | | | +--| (63) | | | | | +--URG16874.1_Mitoviridae_sp | | | | +---------| (100) | | | | | +--URG16786.1_Mitoviridae_sp | | | | +--| (97) | | | | | +--QDH88794.1_Mitovirus_sp | | | | +--| (100) | | | | +--URG16758.1_Mitoviridae_sp | | | +--| (52) | | | | +-----------------UJQ92550.1_Mitoviridae_sp | | | +--| (65) | | | | | +----------UUW21442.1_Sanya_mito_lik | | | | +--| (79) | | | | +------------GEAB01124828.1_Psammomys_ | | | +--| (75) | | | | | +-----------GIUT01051606.1_Polycarpa_ | | | | +----| (100) | | | | | +--Guangdong_mitolike_virus_ | | | | | +----| (100) | | | | | | +---Yunnan_sediment_mitolike_ | | | | +--| (100) | | | | | +--Guangxi_mitolike_virus_11 | | | | | +--| (100) | | | | | | +--Sichuan_sediment_mitolike | | | | | +--| (100) | | | | | | +--Sichua_sediment_mitolike_ | | | | | +--| (89) | | | | | | | +--Guangx_mitolike_virus_5_k | | | | | | +----| (100) | | | | | | +--Henan_mitolike_virus_15_k | | | | +--| (92) | | | | | +--Guangxi_mitolike_9_306R-k | | | | | +--| (100) | | | | | | +--Henan_mitolike_virus_3_k1 | | | | | +--| (100) | | | | | | +--Melbourne_fly_narnavirus_ | | | | +--| (77) | | | | +-----Heilongjiang_sediment_mit | | | +--| (74) | | | | | +---------------URG16542.1_Mitoviridae_sp | | | | +--| (69) | | | | | +--------La_Roche_virus | | | | | +--| (99) | | | | | | | +--------------QQM16292.1_Konsystermes_v | | | | | | | +--| (100) | | | | | | | | +---Mitovirus_JS5 | | | | | | | +---| (100) | | | | | | | | | +--QIS88017.1_le_Maire_virus | | | | | | | | | +---| (100) | | | | | | | | | | | +--QIS88049.1_de_Nodal_virus | | | | | | | | | | +--| (100) | | | | | | | | | | +--Schouten_virus | | | | | | | | +--| (99) | | | | | | | | | +--QIJ70072.1_Wyatt_narna_li | | | | | | | | | +--| (100) | | | | | | | | | | +--URG16809.1_Mitoviridae_sp | | | | | | | | +--| (99) | | | | | | | | +--------Mensystermes_virus | | | | | | +--| (100) | | | | | | +----------QIS87961.1_Halley_virus | | | | +--| (100) | | | | +------------Punsystermes_virus | | | +--| (93) | | | | | +---------QIS87963.1_Kagge_virus | | | | | +--| (93) | | | | | | +----------QIS88016.1_Biscoe_virus | | | | +---------| (100) | | | | | +--GFTX01082149.1_Ulva_lactu | | | | | +------| (100) | | | | | | +---HBWR010342209.1_Aplysina_ | | | | +--| (99) | | | | | +--QIJ70059.1_Orin_narna-lik | | | | | +---| (100) | | | | | | | +--URG16528.1_Leviviridae_sp | | | | | | +--| (100) | | | | | | +--QIJ70060.1_Orin_narna_lik | | | | +-------| (100) | | | | +--URG15843.1_Leviviridae_sp | | | +--| (97) | | | | | +-------Saccharomyces_20S_RNA_nar | | | | +-------------------| (100) | | | | +---------Saccharomyces_23S_RNA_nar | | +--| (79) | | | +---------DAZ90600_Halichondria_pan | | | +---| (100) | | | | +------DAZ90602_Halisarca_dujard | | | +--| (76) | | | | +------------DAZ90604_Henricia_sp_mito | | | +--| (84) | | | | | +----------DAZ90603_Calvadosia_cruxm | | | | +--| (70) | | | | +-------------------DAZ90601_Halichondria_pan | | | +--| (98) | | | | | +-----------DAZ90606_Nebalia_bipes_mi | | | | +--| (98) | | | | | +----APG77262_Wenling_narna_li | | | | +---| (100) | | | | | +----DAZ90609_Egaenus_convexus | | | | +--| (91) | | | | | +-----QNM37825_Thrips_tabaci_as | | | | | +--| (100) | | | | | | | +--DAD49837_Lutzomyia_longip | | | | | | +--| (100) | | | | | | | +---QIR30279_Plasmopara_vitic | | | | | | +--| (100) | | | | | | +--QQP18722_Soybean_thrips_m | | | | +--| (93) | | | | | +--QQM16246_Lunsystermes_vir | | | | | +--| (87) | | | | | | +--QQM16245_Rinsystermes_vir | | | | | +--| (59) | | | | | | +--QQM16244_Kensystermes_vir | | | | | +--| (100) | | | | | | +--MW052093_Wunsystermes_vir | | | | | +--| (100) | | | | | | +--DAZ90604_Hanseniella_sp_m | | | | | +--| (100) | | | | | | +------DAZ90605_Tigriopus_califo | | | | +--| (92) | | | | +----DAZ90607_Glomeridella_min | | +--| (84) | | | +------------------------GIFJ01468976.1_Halichondr | | +--| (86) | | | +---MW648461.1_Grapevine-asso | | | +--| (100) | | | | | +---QXN75365.1_Grapevine_asso | | | | +--| (100) | | | | +---QXN75364.1_Grapevine_asso | | | +--| (100) | | | | | +----YP_010799133.1_Ophiostoma | | | | +--| (100) | | | | +---ON929979.1_Hymenoscyphus_ | | | +--| (99) | | | | +---MW648460.1_Grapevine-asso | | | +--| (99) | | | | | +--UNG44319.1_Fusarium_asiat | | | | +-----| (100) | | | | +--MZ969057.1_Fusarium_asiat | | +-------| (100) | | | +--MN034141.1_Mitovirus_sp | | +---| (100) | | +--MN035528.1_Mitovirus_sp | +--| (97) | | | +--AKN79252_Alternaria_brass | | | +--| (100) | | | | +--BAV53122_Alternaria_arbor | | | +--| (100) | | | | +----AAN05635_Gremmeniella_mit | | | +--| (100) | | | | | +--QPK91779_Fusarium_andiyaz | | | | | +--| (100) | | | | | | +---BAV56289_Fusarium_poae_mi | | | | +--| (100) | | | | | +--QPK91778_Fusarium_vertici | | | | +--| (100) | | | | +--AZP53929_Nigrospora_oryza | | | +--| (98) | | | | | +--BAQ36629_Fusarium_globosu | | | | | +--| (100) | | | | | | | +--AHI43534_Fusarium_circina | | | | | | +--| (100) | | | | | | +--AHI43533_Fusarium_circina | | | | | +--| (99) | | | | | | +--BAQ36630_Fusarium_coerule | | | | | +--| (100) | | | | | | +--BAV56290_Fusarium_poae_mi | | | | | +--| (100) | | | | | | +--AAT09164_Thielaviopsis_ba | | | | | +--| (77) | | | | | | | +--AGC24233_Sclerotinia_scle | | | | | | | +--| (100) | | | | | | | | | +--CEZ26303_Botrytis_cinerea | | | | | | | | +--| (100) | | | | | | | | +--ANJ77669_Sclerotinia_niva | | | | | | +--| (99) | | | | | | +---AVZ65960_Leptosphaeria_bi | | | | +--| (100) | | | | | +--QNS28825_Diaporthe_rudis_ | | | | +--| (100) | | | | | +--CEZ26297_Botrytis_cinerea | | | | +--| (100) | | | | +--AEX91878_Sclerotinia_scle | | +----| (100) | | +------S1AEY76153_Gremmeniella_a | +--| (75) | | | +------AMQ67414_Cronartium_ribic | | | +--| (99) | | | | | +------AMQ67417_Cronartium_ribic | | | | +--| (99) | | | | +--------AMQ67416_Cronartium_ribic | | +--| (69) | | | +--------AMQ67418_Cronartium_ribic | | | +--| (58) | | | | +------BAD72871_Helicobasidium_m | | | +--| (99) | | | | +--------AZY91986_Puccinia_striifo | | +--| (75) | | | +-------AMQ67415_Cronartium_ribic | | +--| (88) | | +----------DAC76947_Entomophthora_mu +--| (82) | +-----AHX84135S_clerotinia_scle | +--| (69) | | | +--AZG04290_Hymenoscyphus_fr | | +-----| (100) | | +--AIU44705_Hymenoscyphus_fr +--| (99) +---------------AEX91879_Sclerotinia_scle Consensus tree in newick format: 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TIME STAMP ---------- Date and time: Wed Jul 26 09:46:03 2023 Total CPU time used: 32473.49975 seconds (9h:1m:13s) Total wall-clock time used: 10892.9584 seconds (3h:1m:32s)